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SUMMER SCHOOL - Module 4 |
Module 4 / Microbial Genomics & Metagenomics Workshop Dates: June 20th – June24th 2022 Organizer: M. Pilar Francino (francino_pil@gva.es)
Module costs: 350 euros
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| Instructors:
Module program: Monday June 20th: - 14:00 - 14:30 Welcome and Overview of the Workshop by Dr. M. Pilar Francino. Break - 15:45 - 16:45 Introduction to the Analysis of Bacterial Communities by Dr. María José Gosalbes. Break - 17:00 - 18:00 Introduction to Metatranscriptomics by Dr. María José Gosalbes. Break - 18:15 - 20:00 Unix commands and moving around the system by David Pérez-Villarroya. - 14:00 - 15:00 Informatic Processing and Quality Control of Sequencing Reads by Dr. Giuseppe D’Auria. Break - 15:15 - 16:45 Sequence Assembly by Dr. Giuseppe D’Auria. Break - 17:00 - 17:30 IMG UI Intro: Live Demonstration by Dr. Natalia Ivanova Break CLASSWORK or HOMEWORK - 18:45 - 19:30 Hands-on Exercise (student work) - 14:00 - 15:30 Microbial Diversity Analyses with 16S rRNA by Mariana Reyes Break - 15:45 - 16:45 Microbial Diversity Analyses with 16S rRNA by Mariana Reyes. Break - 17:00 - 18:00 IMG/M Metagenome Analysis: Live Demonstration by Dr. Natalia Ivanova Break CLASSWORK or HOMEWORK - 18:45 - 19:30 Hands-on Exercise (student work) - 14:00 - 15:00 Microbial communities, the human microbiome and its relationship to health by Dr. M. Pilar Francino. Break - 15:15 - 16:45 CRISPR analyses by David Páez-Espino. Break - 17:00 - 17:30 Preparation of student analysis projects - students form groups and carry out genome or metagenome analysis project - 14:00 - 15:30 Metagenome Analysis Research Talk by Dr. M. Pilar Francino. Break - 15:45- 16:45 Uncovering Earth’s virome by David Páez-Espino. Break - 17:00 - 19:00 Presentations of projects by student groups | ||||||||